PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma137g00180.1
Common NameZOSMA_137G00180
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 396aa    MW: 42559.8 Da    PI: 6.72
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma137g00180.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.52.8e-14192238354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  Zosma137g00180.1 192 KSHSEAERRRRERINTHLARLRSLLPST-----TKTDKASLLAEVIQHVKEL 238
                       79*************************9.....8****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.882189238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-11192238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-14193249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-15193251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-13195244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.04E-5202241No hitNo description
Gene3DG3DSA:3.30.70.2602.5E-5276348No hitNo description
CDDcd048734.67E-9276348No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MELYKGDEGS SPSNSTSISE AIFQTFHPPA PPSSVTHHHN TQDRSVVAAA AATTAAESSG  60
GVGLISQLQG FNILPSQSLP LPIASILANS SNQMYSSTTH DHVPPIYHYQ QQQMHQLQQN  120
QQLYSSLLPP PHMPLYGSDH VVLPPIGMPT GFYVGGSGGG GTSLTPFSCL QSEFGKMSAQ  180
EMMDAKALAA SKSHSEAERR RRERINTHLA RLRSLLPSTT KTDKASLLAE VIQHVKELKR  240
QAAEIVEQIS VPTECDELTV HSANEEEGGK LVVKASICCD DRSDLLSEVI KALKALKLRT  300
LKAEITTLGG RVKNVLVVTE EDVDCMNPDE SKHHYSITSI QDALKAVMER TTSAPDANNN  360
DPSSSSSSAN KPTGTGTSTK KQRTTNLSSI LEKNL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197202ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009409645.17e-84PREDICTED: transcription factor bHLH30-like
SwissprotQ9S7Y12e-70BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A0K9PY530.0A0A0K9PY53_Z
STRINGSi039730m2e-81(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19183898
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-54bHLH family protein